Add QR eigen library: implicit Wilkinson-shifted QR for symmetric matrices
Merge-Checker / build_and_test (pull_request) Failing after 28m10s

- src/QR.hpp / src/QR.cpp: fully templated QR::EigenQR (N >= 2), no heap
  allocation (3*N^2 float working buffers on stack). Givens tridiagonalization
  (bottom-up) + implicit Wilkinson-shifted QR with bulge chasing, relative
  deflation, exact-zero peeling, closed-form 2x2 termination.
- Matrix::EigenQR now delegates to QR::EigenQR (old unshifted body removed);
  eigenvalues sorted descending, eigenvectors in columns of the output.
- unit-tests/qr-build-blocks-tests.cpp: 8 building-block test cases
  (215 assertions) with scipy/numpy references.
- unit-tests/qr-reference-values.py: numpy/scipy reference generator mirroring
  every building block and the full pipeline (eigh, n=3..8).
- CMake: new 'qr' static library; Matrix links against it;
  qr-build-blocks-tests target enabled.
This commit is contained in:
2026-08-25 14:02:56 -04:00
parent ab0cea104c
commit c9a9492fcf
9 changed files with 1812 additions and 72 deletions
+11
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@@ -13,6 +13,7 @@ add_executable(matrix-tests matrix-tests.cpp)
target_link_libraries(matrix-tests
PRIVATE
matrix
qr
Catch2::Catch2WithMain
)
@@ -52,4 +53,14 @@ target_link_libraries(svd-integration-test
matrix
svd
Catch2::Catch2WithMain
)
# QR building block tests
add_executable(qr-build-blocks-tests qr-build-blocks-tests.cpp)
target_link_libraries(qr-build-blocks-tests
PRIVATE
matrix
qr
Catch2::Catch2WithMain
)
+266 -17
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@@ -4,6 +4,7 @@
// include the module you're going to test next
#include "Matrix.hpp"
#include "QR.hpp"
#include "SVD.hpp"
// any other libraries
@@ -601,8 +602,78 @@ TEST_CASE("QR Decompositions", "Matrix") {
}
}
// ============================================================================
// Eigen QR Helpers (scipy references; eigenvector checks are sign-invariant)
// ============================================================================
/**
* @brief Normalized eigenpair residual ||A v - lambda v|| / (||A||_F + |lambda|)
*/
template <uint8_t N>
static float eigenResidual(const Matrix<N, N> &A, float lambda,
const Matrix<N, 1> &v) {
Matrix<N, 1> Av{};
A.Mult(v, Av);
float sum = 0.0f;
float frob = 0.0f;
for (uint8_t i = 0; i < N; i++) {
float d = Av.Get(i, 0) - lambda * v.Get(i, 0);
sum += d * d;
for (uint8_t j = 0; j < N; j++) {
float a = A.Get(i, j);
frob += a * a;
}
}
float scale = sqrtf(frob) + fabsf(lambda);
return sqrtf(sum) / scale;
}
/**
* @brief Column of the eigenvector matrix; used for the residual check.
*/
template <uint8_t N>
static Matrix<N, 1> eigenColumn(const Matrix<N, N> &V, uint8_t col) {
Matrix<N, 1> v{};
for (uint8_t i = 0; i < N; i++) {
v[i][0] = V.Get(i, col);
}
return v;
}
/**
* @brief Check V^T V ~ I (eigenvectors orthonormal).
*/
template <uint8_t N>
static bool isOrthogonal(const Matrix<N, N> &V, float tol = 1e-4f) {
Matrix<N, N> Vt = V.Transpose();
Matrix<N, N> VtV{};
Vt.Mult(V, VtV);
for (uint8_t i = 0; i < N; i++) {
for (uint8_t j = 0; j < N; j++) {
float expected = (i == j) ? 1.0f : 0.0f;
if (fabsf(VtV.Get(i, j) - expected) > tol) {
return false;
}
}
}
return true;
}
/**
* @brief Sign-invariant component check: |actual| within max(1e-4, 1e-3*|ref|)
* of ref (ref is the ABSOLUTE value from the scipy reference).
*/
static bool componentMatches(float actual, float refAbs) {
float a = fabsf(actual);
float tol = 1e-4f;
if (refAbs * 1e-3f > tol) {
tol = refAbs * 1e-3f;
}
return fabsf(a - refAbs) <= tol;
}
TEST_CASE("Eigenvalues and Vectors", "Matrix") {
SECTION("2x2 Eigen") {
SECTION("2x2 Eigen (nonsymmetric, closed form)") {
Matrix<2, 2> A{1.0f, 2.0f, 3.0f, 4.0f};
Matrix<2, 2> vectors{};
Matrix<2, 1> values{};
@@ -615,28 +686,206 @@ TEST_CASE("Eigenvalues and Vectors", "Matrix") {
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinRel(-0.372281f, 1e-4f));
}
SECTION("3x3 Rank Defficient Eigen") {
SKIP("Skipping this because QR decomposition isn't ready for it");
// this symmetrix tridiagonal matrix is well behaved for testing
Matrix<3, 3> A{1, 2, 3, 4, 5, 6, 7, 8, 9};
// Reference values: numpy.linalg.eigh on float32 matrices.
// Eigenvector component references are ABSOLUTE values (signs arbitrary).
SECTION("3x3 Symmetric Eigen") {
Matrix<3, 3> A{1, 2, 3, 2, 5, 8, 3, 8, 9};
Matrix<3, 3> vectors{};
Matrix<3, 1> values{};
A.EigenQR(vectors, values, 1000000, 1e-8f);
A.EigenQR(vectors, values, 10000, 1e-6f);
std::string strBuf1 = "";
vectors.ToString(strBuf1);
std::cout << "Vectors:\n" << strBuf1 << std::endl;
strBuf1 = "";
values.ToString(strBuf1);
std::cout << "Values:\n" << strBuf1 << std::endl;
// eigenvalues (descending)
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(16.102417f, 1e-4f));
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinRel(0.191920f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinRel(-1.2943381f, 1e-4f));
REQUIRE_THAT(vectors[0][0], Catch::Matchers::WithinRel(0.23197f, 1e-4f));
REQUIRE_THAT(vectors[1][0], Catch::Matchers::WithinRel(0.525322f, 1e-4f));
REQUIRE_THAT(vectors[2][0], Catch::Matchers::WithinRel(0.81867f, 1e-4f));
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(-1.11684f, 1e-4f));
// eigenvector |components| (sign-invariant)
REQUIRE(componentMatches(vectors[0][0], 0.231657207f));
REQUIRE(componentMatches(vectors[1][0], 0.59582746f));
REQUIRE(componentMatches(vectors[2][0], 0.768976331f));
REQUIRE(componentMatches(vectors[0][1], 0.956842422f));
REQUIRE(componentMatches(vectors[1][1], 0.282139271f));
REQUIRE(componentMatches(vectors[2][1], 0.0696421042f));
REQUIRE(componentMatches(vectors[0][2], 0.175463736f));
REQUIRE(componentMatches(vectors[1][2], 0.75192225f));
REQUIRE(componentMatches(vectors[2][2], 0.635472536f));
// eigenvectors orthonormal; eigenpair residuals small
REQUIRE(isOrthogonal(vectors));
for (uint8_t col = 0; col < 3; col++) {
REQUIRE(eigenResidual(A, values[col][0], eigenColumn(vectors, col)) <
1e-4f);
}
}
SECTION("3x3 Rank Deficient Eigen") {
// A = v v^T with v = [1, 2, 3]: eigenvalues {14, 0, 0}
Matrix<3, 3> A{1, 2, 3, 2, 4, 6, 3, 6, 9};
Matrix<3, 3> vectors{};
Matrix<3, 1> values{};
A.EigenQR(vectors, values, 10000, 1e-6f);
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(14.0f, 1e-4f));
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinAbs(0.0f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinRel(16.1168f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinAbs(0.0f, 1e-4f));
// dominant eigenvector is v/|v| (sign-invariant); the two null-space
// eigenvectors may be ANY orthonormal basis of the null plane, so only
// orthogonality + residuals are checked for the full matrix.
REQUIRE(componentMatches(vectors[0][0], 0.267261237f));
REQUIRE(componentMatches(vectors[1][0], 0.534522474f));
REQUIRE(componentMatches(vectors[2][0], 0.801783741f));
REQUIRE(isOrthogonal(vectors));
for (uint8_t col = 0; col < 3; col++) {
REQUIRE(eigenResidual(A, values[col][0], eigenColumn(vectors, col)) <
1e-4f);
}
}
SECTION("4x4 Symmetric Eigen") {
Matrix<4, 4> A{2, 1, 0, 1, 1, 3, 1, 0, 0, 1, 4, 1, 1, 0, 1, 5};
Matrix<4, 4> vectors{};
Matrix<4, 1> values{};
A.EigenQR(vectors, values, 10000, 1e-6f);
// eigenvalues are exactly {6, 4, 3, 1}
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(6.0f, 1e-4f));
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinRel(4.0f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinRel(3.0f, 1e-4f));
REQUIRE_THAT(values[3][0], Catch::Matchers::WithinRel(1.0f, 1e-4f));
// eigenvector |components| (sign-invariant)
REQUIRE(componentMatches(vectors[0][0], 0.258198887f));
REQUIRE(componentMatches(vectors[1][0], 0.258198887f));
REQUIRE(componentMatches(vectors[2][0], 0.516397774f));
REQUIRE(componentMatches(vectors[3][0], 0.774596691f));
REQUIRE(componentMatches(vectors[0][1], 0.0f));
REQUIRE(componentMatches(vectors[1][1], 0.577350259f));
REQUIRE(componentMatches(vectors[2][1], 0.577350259f));
REQUIRE(componentMatches(vectors[3][1], 0.577350259f));
REQUIRE(componentMatches(vectors[0][2], 0.577350259f));
REQUIRE(componentMatches(vectors[1][2], 0.577350259f));
REQUIRE(componentMatches(vectors[2][2], 0.577350259f));
REQUIRE(componentMatches(vectors[3][2], 0.0f));
REQUIRE(componentMatches(vectors[0][3], 0.774596691f));
REQUIRE(componentMatches(vectors[1][3], 0.516397774f));
REQUIRE(componentMatches(vectors[2][3], 0.258198887f));
REQUIRE(componentMatches(vectors[3][3], 0.258198887f));
REQUIRE(isOrthogonal(vectors));
for (uint8_t col = 0; col < 4; col++) {
REQUIRE(eigenResidual(A, values[col][0], eigenColumn(vectors, col)) <
1e-4f);
}
}
SECTION("5x5 Symmetric Eigen") {
Matrix<5, 5> A{3, 1, 0, 0, 1, 1, 4, 1, 0, 0, 0, 1, 5, 1, 0, 0, 0, 1, 6, 1,
1, 0, 0, 1, 7};
Matrix<5, 5> vectors{};
Matrix<5, 1> values{};
A.EigenQR(vectors, values, 10000, 1e-6f);
// eigenvalues (descending)
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(7.90154457f, 1e-4f));
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinRel(6.20044184f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinRel(5.14503145f, 1e-4f));
REQUIRE_THAT(values[3][0], Catch::Matchers::WithinRel(3.61823463f, 1e-4f));
REQUIRE_THAT(values[4][0], Catch::Matchers::WithinRel(2.13474774f, 1e-4f));
// eigenvector |components| (sign-invariant)
REQUIRE(componentMatches(vectors[0][0], 0.182430908f));
REQUIRE(componentMatches(vectors[1][0], 0.102749094f));
REQUIRE(componentMatches(vectors[2][0], 0.21844925f));
REQUIRE(componentMatches(vectors[3][0], 0.531091094f));
REQUIRE(componentMatches(vectors[4][0], 0.791444063f));
REQUIRE(componentMatches(vectors[0][1], 0.0877681747f));
REQUIRE(componentMatches(vectors[1][1], 0.245861098f));
REQUIRE(componentMatches(vectors[2][1], 0.628771126f));
REQUIRE(componentMatches(vectors[3][1], 0.508941948f));
REQUIRE(componentMatches(vectors[4][1], 0.526758015f));
REQUIRE(componentMatches(vectors[0][2], 0.349721253f));
REQUIRE(componentMatches(vectors[1][2], 0.628706098f));
REQUIRE(componentMatches(vectors[2][2], 0.370167077f));
REQUIRE(componentMatches(vectors[3][2], 0.575020194f));
REQUIRE(componentMatches(vectors[4][2], 0.121457018f));
REQUIRE(componentMatches(vectors[0][3], 0.429638386f));
REQUIRE(componentMatches(vectors[1][3], 0.498553723f));
REQUIRE(componentMatches(vectors[2][3], 0.619968951f));
REQUIRE(componentMatches(vectors[3][3], 0.35809797f));
REQUIRE(componentMatches(vectors[4][3], 0.232936427f));
REQUIRE(componentMatches(vectors[0][4], 0.807540476f));
REQUIRE(componentMatches(vectors[1][4], 0.534011006f));
REQUIRE(componentMatches(vectors[2][4], 0.188524753f));
REQUIRE(componentMatches(vectors[3][4], 0.00615991838f));
REQUIRE(componentMatches(vectors[4][4], 0.164715111f));
REQUIRE(isOrthogonal(vectors));
for (uint8_t col = 0; col < 5; col++) {
REQUIRE(eigenResidual(A, values[col][0], eigenColumn(vectors, col)) <
1e-4f);
}
}
SECTION("6x6 Symmetric Eigen") {
Matrix<6, 6> A{4, 1, 0, 0, 0, 1, 1, 5, 1, 0, 0, 0, 0, 1, 6, 1, 0, 0, 0, 0,
1, 7, 1, 0, 0, 0, 0, 1, 8, 1, 1, 0, 0, 0, 1, 3};
Matrix<6, 6> vectors{};
Matrix<6, 1> values{};
A.EigenQR(vectors, values, 10000, 1e-6f);
// eigenvalues (descending)
REQUIRE_THAT(values[0][0], Catch::Matchers::WithinRel(8.86080551f, 1e-4f));
REQUIRE_THAT(values[1][0], Catch::Matchers::WithinRel(7.25410175f, 1e-4f));
REQUIRE_THAT(values[2][0], Catch::Matchers::WithinRel(6.11490774f, 1e-4f));
REQUIRE_THAT(values[3][0], Catch::Matchers::WithinRel(4.88509226f, 1e-4f));
REQUIRE_THAT(values[4][0], Catch::Matchers::WithinRel(3.74589825f, 1e-4f));
REQUIRE_THAT(values[5][0], Catch::Matchers::WithinRel(2.13919425f, 1e-4f));
// eigenvector |components| (sign-invariant)
REQUIRE(componentMatches(vectors[0][0], 0.0430923924f));
REQUIRE(componentMatches(vectors[1][0], 0.0662503168f));
REQUIRE(componentMatches(vectors[2][0], 0.212687209f));
REQUIRE(componentMatches(vectors[3][0], 0.542206466f));
REQUIRE(componentMatches(vectors[4][0], 0.7962538f));
REQUIRE(componentMatches(vectors[5][0], 0.143213451f));
REQUIRE(componentMatches(vectors[0][1], 0.0623276457f));
REQUIRE(componentMatches(vectors[1][1], 0.307613879f));
REQUIRE(componentMatches(vectors[2][1], 0.631065309f));
REQUIRE(componentMatches(vectors[3][1], 0.483806193f));
REQUIRE(componentMatches(vectors[4][1], 0.508129358f));
REQUIRE(componentMatches(vectors[5][1], 0.104793385f));
REQUIRE(componentMatches(vectors[0][2], 0.374228716f));
REQUIRE(componentMatches(vectors[1][2], 0.605694294f));
REQUIRE(componentMatches(vectors[2][2], 0.301064402f));
REQUIRE(componentMatches(vectors[3][2], 0.571099699f));
REQUIRE(componentMatches(vectors[4][2], 0.204411641f));
REQUIRE(componentMatches(vectors[5][2], 0.185764849f));
REQUIRE(componentMatches(vectors[0][3], 0.571099699f));
REQUIRE(componentMatches(vectors[1][3], 0.301064402f));
REQUIRE(componentMatches(vectors[2][3], 0.605694294f));
REQUIRE(componentMatches(vectors[3][3], 0.374228716f));
REQUIRE(componentMatches(vectors[4][3], 0.185764849f));
REQUIRE(componentMatches(vectors[5][3], 0.204411641f));
REQUIRE(componentMatches(vectors[0][4], 0.483806193f));
REQUIRE(componentMatches(vectors[1][4], 0.631065309f));
REQUIRE(componentMatches(vectors[2][4], 0.307613879f));
REQUIRE(componentMatches(vectors[3][4], 0.0623276457f));
REQUIRE(componentMatches(vectors[4][4], 0.104793385f));
REQUIRE(componentMatches(vectors[5][4], 0.508129358f));
REQUIRE(componentMatches(vectors[0][5], 0.542206466f));
REQUIRE(componentMatches(vectors[1][5], 0.212687209f));
REQUIRE(componentMatches(vectors[2][5], 0.0662503168f));
REQUIRE(componentMatches(vectors[3][5], 0.0430923924f));
REQUIRE(componentMatches(vectors[4][5], 0.143213451f));
REQUIRE(componentMatches(vectors[5][5], 0.7962538f));
REQUIRE(isOrthogonal(vectors));
for (uint8_t col = 0; col < 6; col++) {
REQUIRE(eigenResidual(A, values[col][0], eigenColumn(vectors, col)) <
1e-4f);
}
}
}
+581
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@@ -0,0 +1,581 @@
// include the unit test framework first
#include <catch2/catch_test_macros.hpp>
#include <catch2/matchers/catch_matchers_floating_point.hpp>
// include the module you're going to test next
#include "Matrix.hpp"
#include "QR.hpp"
// any other libraries
#include <array>
#include <cmath>
#include <iostream>
// ============================================================================
// Helpers
// ============================================================================
/**
* @brief Frobenius norm of an N x N matrix.
*/
template <uint8_t N>
static float frob(const Matrix<N, N> &M) {
float sum = 0.0f;
for (uint8_t i = 0; i < N; i++)
for (uint8_t j = 0; j < N; j++) {
float v = M.Get(i, j);
sum += v * v;
}
return sqrtf(sum);
}
/**
* @brief Check M is orthogonal (M^T M ~ I).
*/
template <uint8_t N>
static bool isOrthogonal(const Matrix<N, N> &M, float tol = 1e-5f) {
Matrix<N, N> Mt = M.Transpose();
Matrix<N, N> MtM{};
Mt.Mult(M, MtM);
for (uint8_t i = 0; i < N; i++)
for (uint8_t j = 0; j < N; j++) {
float expected = (i == j) ? 1.0f : 0.0f;
if (fabsf(MtM.Get(i, j) - expected) > tol)
return false;
}
return true;
}
/**
* @brief 3x3 trace.
*/
static float trace3(const Matrix<3, 3> &A) {
return A.Get(0, 0) + A.Get(1, 1) + A.Get(2, 2);
}
/**
* @brief 3x3 sum of principal 2x2 minors (2nd elementary invariant).
*/
static float e2_3x3(const Matrix<3, 3> &A) {
return A.Get(0, 0) * A.Get(1, 1) - A.Get(0, 1) * A.Get(0, 1) +
A.Get(0, 0) * A.Get(2, 2) - A.Get(0, 2) * A.Get(0, 2) +
A.Get(1, 1) * A.Get(2, 2) - A.Get(1, 2) * A.Get(1, 2);
}
/**
* @brief 3x3 determinant.
*/
static float det3(const Matrix<3, 3> &A) {
return A.Get(0, 0) *
(A.Get(1, 1) * A.Get(2, 2) - A.Get(1, 2) * A.Get(2, 1)) -
A.Get(0, 1) *
(A.Get(1, 0) * A.Get(2, 2) - A.Get(1, 2) * A.Get(2, 0)) +
A.Get(0, 2) *
(A.Get(1, 0) * A.Get(2, 1) - A.Get(1, 1) * A.Get(2, 0));
}
/**
* @brief Sign-invariant comparison of |actual| against refAbs.
*/
static bool matchesAbs(float actual, float refAbs, float relTol = 1e-5f,
float absTol = 1e-6f) {
float a = fabsf(actual);
if (refAbs < 1e-3f)
return a < absTol + relTol;
return fabsf(a - refAbs) <= relTol * refAbs;
}
// ============================================================================
// TEST 1: GivensRotation
// ============================================================================
TEST_CASE("QR Building Block: GivensRotation", "[Matrix][QR]") {
// R = [[c, s], [-s, c]] must satisfy R * (a, b)^T = (r, 0)^T.
{
// Reference: hypot(2, 1) = sqrt(5) = 2.236067977
float c = 0, s = 0;
QR::GivensRotation(2.0f, 1.0f, c, s);
REQUIRE_THAT(c, Catch::Matchers::WithinRel(0.894427191f, 1e-6f));
REQUIRE_THAT(s, Catch::Matchers::WithinRel(0.447213595f, 1e-6f));
REQUIRE_THAT(c * 2.0f + s * 1.0f,
Catch::Matchers::WithinRel(2.236067977f, 1e-6f));
REQUIRE_THAT(-s * 2.0f + c * 1.0f, Catch::Matchers::WithinAbs(0.0f, 1e-6f));
}
{
// Reference: hypot(3, 4) = 5 exactly
float c = 0, s = 0;
QR::GivensRotation(3.0f, 4.0f, c, s);
REQUIRE_THAT(c, Catch::Matchers::WithinRel(0.6f, 1e-6f));
REQUIRE_THAT(s, Catch::Matchers::WithinRel(0.8f, 1e-6f));
REQUIRE_THAT(c * 3.0f + s * 4.0f, Catch::Matchers::WithinRel(5.0f, 1e-6f));
REQUIRE_THAT(-s * 3.0f + c * 4.0f, Catch::Matchers::WithinAbs(0.0f, 1e-6f));
}
{
// Pure second component: c = 0, s = 1
float c = 1, s = 1;
QR::GivensRotation(0.0f, 5.0f, c, s);
REQUIRE_THAT(c, Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(s, Catch::Matchers::WithinRel(1.0f, 1e-6f));
}
{
// Zero vector: identity rotation
float c = 0, s = 0;
QR::GivensRotation(0.0f, 0.0f, c, s);
REQUIRE_THAT(c, Catch::Matchers::WithinRel(1.0f, 1e-7f));
REQUIRE_THAT(s, Catch::Matchers::WithinAbs(0.0f, 1e-7f));
}
{
// Negative first component preserves the sign of c
float c = 0, s = 0;
QR::GivensRotation(-2.0f, 1.0f, c, s);
REQUIRE_THAT(c, Catch::Matchers::WithinRel(-0.894427191f, 1e-6f));
REQUIRE_THAT(s, Catch::Matchers::WithinRel(0.447213595f, 1e-6f));
REQUIRE_THAT(-s * -2.0f + c * 1.0f, Catch::Matchers::WithinAbs(0.0f, 1e-6f));
}
}
// ============================================================================
// TEST 2: ApplyRotationBothSides (similarity A <- G A G^T)
// ============================================================================
TEST_CASE("QR Building Block: ApplyRotationBothSides", "[Matrix][QR]") {
// Reference (numpy, float64): A = [[2,1,0],[1,3,1],[0,1,4]], i = 0,
// Givens(2,1) -> G A G^T =
// [[ 3.0, 1.0, 0.447213595],
// [ 1.0, 2.0, 0.894427191],
// [ 0.447213595, 0.894427191, 4.0]]
// (Note: G A G^T with G zeroing (2,1) sends the A[0][1] coupling into the
// (0,2) corner, NOT into the subdiagonal -- the subdiagonal-zeroing happens
// in the QR chase context where the bulge column has the right shape.)
{
Matrix<3, 3> A{2, 1, 0, 1, 3, 1, 0, 1, 4};
float c = 0.894427191f, s = 0.447213595f;
QR::ApplyRotationBothSides(A, 0, c, s);
REQUIRE_THAT(A.Get(0, 0), Catch::Matchers::WithinRel(3.0f, 1e-5f));
REQUIRE_THAT(A.Get(0, 1), Catch::Matchers::WithinRel(1.0f, 1e-5f));
REQUIRE_THAT(A.Get(0, 2),
Catch::Matchers::WithinRel(0.447213595f, 1e-5f));
REQUIRE_THAT(A.Get(1, 1), Catch::Matchers::WithinRel(2.0f, 1e-5f));
REQUIRE_THAT(A.Get(1, 2),
Catch::Matchers::WithinRel(0.894427191f, 1e-5f));
REQUIRE_THAT(A.Get(2, 2), Catch::Matchers::WithinRel(4.0f, 1e-5f));
// Symmetry must be preserved exactly in both triangles
for (uint8_t i = 0; i < 3; i++)
for (uint8_t j = 0; j < 3; j++)
REQUIRE(A.Get(i, j) == A.Get(j, i));
}
// Same check at i = 1.
// Reference (numpy, float64): B = [[5,0,1],[0,6,2],[1,2,7]], i = 1,
// Givens(6,2) -> G B G^T =
// [[ 5.0, 0.316227766, 0.948683298],
// [ 0.316227766, 7.3, 1.9],
// [ 0.948683298, 1.9, 5.7]]
{
Matrix<3, 3> B{5, 0, 1, 0, 6, 2, 1, 2, 7};
float c = 0.948683298f, s = 0.316227766f;
QR::ApplyRotationBothSides(B, 1, c, s);
REQUIRE_THAT(B.Get(0, 0), Catch::Matchers::WithinRel(5.0f, 1e-5f));
REQUIRE_THAT(B.Get(0, 1),
Catch::Matchers::WithinRel(0.316227766f, 1e-5f));
REQUIRE_THAT(B.Get(0, 2),
Catch::Matchers::WithinRel(0.948683298f, 1e-5f));
REQUIRE_THAT(B.Get(1, 1), Catch::Matchers::WithinRel(7.3f, 1e-5f));
REQUIRE_THAT(B.Get(1, 2), Catch::Matchers::WithinRel(1.9f, 1e-5f));
REQUIRE_THAT(B.Get(2, 2), Catch::Matchers::WithinRel(5.7f, 1e-5f));
for (uint8_t i = 0; i < 3; i++)
for (uint8_t j = 0; j < 3; j++)
REQUIRE(B.Get(i, j) == B.Get(j, i));
}
// Identity rotation leaves the matrix unchanged
{
Matrix<3, 3> C{1, 2, 3, 2, 4, 5, 3, 5, 6};
QR::ApplyRotationBothSides(C, 1, 1.0f, 0.0f);
REQUIRE(C.Get(0, 0) == 1.0f);
REQUIRE(C.Get(0, 1) == 2.0f);
REQUIRE(C.Get(0, 2) == 3.0f);
REQUIRE(C.Get(1, 1) == 4.0f);
REQUIRE(C.Get(1, 2) == 5.0f);
REQUIRE(C.Get(2, 2) == 6.0f);
}
// Spectrum invariants (trace, Frobenius norm) are preserved. (c, s)
// must be a unit vector for G A G^T to be a similarity transform.
{
Matrix<3, 3> D{1, 2, 3, 2, 5, 8, 3, 8, 9};
float tr = trace3(D);
float fn = frob(D);
float c = 0.6f, s = 0.8f;
QR::ApplyRotationBothSides(D, 0, c, s);
REQUIRE_THAT(trace3(D), Catch::Matchers::WithinRel(tr, 1e-5f));
REQUIRE_THAT(frob(D), Catch::Matchers::WithinRel(fn, 1e-5f));
}
}
// ============================================================================
// TEST 3: ApplyRotationToVectors (V <- V G^T)
// ============================================================================
TEST_CASE("QR Building Block: ApplyRotationToVectors", "[Matrix][QR]") {
// V = I, i = 0, Givens(2,1): V <- I * G^T with G^T = [[c, -s], [s, c]] =
// [[ c, -s, 0],
// [ s, c, 0],
// [ 0, 0, 1]]
{
Matrix<3, 3> V{0};
V[0][0] = 1;
V[1][1] = 1;
V[2][2] = 1;
float c = 0.894427191f, s = 0.447213595f;
QR::ApplyRotationToVectors(V, 0, c, s);
REQUIRE_THAT(V.Get(0, 0), Catch::Matchers::WithinRel(0.894427191f, 1e-6f));
REQUIRE_THAT(V.Get(0, 1), Catch::Matchers::WithinRel(-0.447213595f, 1e-6f));
REQUIRE_THAT(V.Get(0, 2), Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(V.Get(1, 0), Catch::Matchers::WithinRel(0.447213595f, 1e-6f));
REQUIRE_THAT(V.Get(1, 1), Catch::Matchers::WithinRel(0.894427191f, 1e-6f));
REQUIRE_THAT(V.Get(1, 2), Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(V.Get(2, 0), Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(V.Get(2, 1), Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(V.Get(2, 2), Catch::Matchers::WithinRel(1.0f, 1e-7f));
// Product of rotations must stay orthogonal
REQUIRE(isOrthogonal(V));
}
// Two successive rotations accumulate (V <- V G1^T G2^T)
// Reference (numpy, float64):
// [[ 0.894427191, -0.424264069, 0.141421356],
// [ 0.447213595, 0.848528137, -0.282842712],
// [ 0.0, 0.316227766, 0.948683298]]
{
Matrix<3, 3> V{0};
V[0][0] = 1;
V[1][1] = 1;
V[2][2] = 1;
QR::ApplyRotationToVectors(V, 0, 0.894427191f, 0.447213595f);
QR::ApplyRotationToVectors(V, 1, 0.948683298f, 0.316227766f);
REQUIRE(isOrthogonal(V));
// Column 0 was only touched by the first rotation
REQUIRE_THAT(V.Get(0, 0), Catch::Matchers::WithinRel(0.894427191f, 1e-5f));
REQUIRE_THAT(V.Get(1, 0), Catch::Matchers::WithinRel(0.447213595f, 1e-5f));
REQUIRE_THAT(V.Get(2, 0), Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(V.Get(0, 1), Catch::Matchers::WithinRel(-0.424264069f, 1e-5f));
REQUIRE_THAT(V.Get(0, 2), Catch::Matchers::WithinRel(0.141421356f, 1e-5f));
REQUIRE_THAT(V.Get(1, 2), Catch::Matchers::WithinRel(-0.282842712f, 1e-5f));
REQUIRE_THAT(V.Get(2, 1), Catch::Matchers::WithinRel(0.316227766f, 1e-5f));
REQUIRE_THAT(V.Get(2, 2), Catch::Matchers::WithinRel(0.948683298f, 1e-5f));
}
}
// ============================================================================
// TEST 4: WilkinsonShift
// ============================================================================
TEST_CASE("QR Building Block: WilkinsonShift", "[Matrix][QR]") {
// mu = (a+d)/2 - sign(a-d) * sqrt(((a-d)/2)^2 + b^2)
// Reference: eigenvalues of [[2,1],[1,4]] are 1.5858, 4.4142; closest
// to d = 4 is 4.414213562.
REQUIRE_THAT(QR::WilkinsonShift(2.0f, 1.0f, 4.0f),
Catch::Matchers::WithinRel(4.414213562f, 1e-6f));
// [[5,2],[2,1]]: eigenvalues 0.1716, 5.8284; closest to d = 1 is 0.171572875
REQUIRE_THAT(QR::WilkinsonShift(5.0f, 2.0f, 1.0f),
Catch::Matchers::WithinRel(0.171572875f, 1e-5f));
// Zero off-diagonal: returns d itself (sign(0) = +1 picks d, not a)
REQUIRE_THAT(QR::WilkinsonShift(3.0f, 0.0f, 7.0f),
Catch::Matchers::WithinRel(7.0f, 1e-7f));
REQUIRE_THAT(QR::WilkinsonShift(7.0f, 0.0f, 3.0f),
Catch::Matchers::WithinRel(3.0f, 1e-7f));
// a == d: shift is the larger-magnitude off-diagonal combination
// [[1,3],[3,1]]: eigenvalues -2, 4; closest to d = 1 is -2
REQUIRE_THAT(QR::WilkinsonShift(1.0f, 3.0f, 1.0f),
Catch::Matchers::WithinRel(-2.0f, 1e-6f));
}
// ============================================================================
// TEST 5: Solve2x2Eigen
// ============================================================================
TEST_CASE("QR Building Block: Solve2x2Eigen", "[Matrix][QR]") {
// Symmetric block [[2,1],[1,3]]:
// eigenvalues 1.381966011, 3.618033989;
// eigenvector of 3.618033989 is +/- (0.525731112, 0.850650808)
{
Matrix<2, 2> A{2, 1, 1, 3};
float lHi = 0, lLo = 0, c = 0, s = 0;
QR::Solve2x2Eigen(A, 0, lHi, lLo, c, s);
REQUIRE_THAT(lHi, Catch::Matchers::WithinRel(3.618033989f, 1e-6f));
REQUIRE_THAT(lLo, Catch::Matchers::WithinRel(1.381966011f, 1e-6f));
REQUIRE(matchesAbs(c, 0.525731112f));
REQUIRE(matchesAbs(s, 0.850650808f));
// Residual: A * vHi = lHi * vHi with vHi = (c, s)
REQUIRE_THAT(c * 2.0f + s * 1.0f,
Catch::Matchers::WithinRel(lHi * c, 1e-5f));
REQUIRE_THAT(c * 1.0f + s * 3.0f,
Catch::Matchers::WithinRel(lHi * s, 1e-5f));
// Second eigenvector vLo = (-s, c)
REQUIRE_THAT(-s * 2.0f + c * 1.0f,
Catch::Matchers::WithinRel(lLo * -s, 1e-5f));
REQUIRE_THAT(-s * 1.0f + c * 3.0f,
Catch::Matchers::WithinRel(lLo * c, 1e-5f));
}
// Nonsymmetric block [[1,2],[3,4]] (used by the N == 2 entry point):
// eigenvalues 5.372281323, -0.372281323;
// eigenvector of 5.372281323 is +/- (0.415973558, 0.909376709)
{
Matrix<2, 2> A{1, 2, 3, 4};
float lHi = 0, lLo = 0, c = 0, s = 0;
QR::Solve2x2Eigen(A, 0, lHi, lLo, c, s);
REQUIRE_THAT(lHi, Catch::Matchers::WithinRel(5.372281323f, 1e-6f));
REQUIRE_THAT(lLo, Catch::Matchers::WithinRel(-0.372281323f, 1e-6f));
REQUIRE(matchesAbs(c, 0.415973558f));
REQUIRE(matchesAbs(s, 0.909376709f));
// Both-row residual with vHi = (c, s): A v = l v
REQUIRE_THAT(c * 1.0f + s * 2.0f,
Catch::Matchers::WithinRel(lHi * c, 1e-5f));
REQUIRE_THAT(c * 3.0f + s * 4.0f,
Catch::Matchers::WithinRel(lHi * s, 1e-5f));
}
// Diagonal blocks: eigenvectors are coordinate vectors
{
Matrix<2, 2> A{5, 0, 0, 2};
float lHi = 0, lLo = 0, c = 0, s = 0;
QR::Solve2x2Eigen(A, 0, lHi, lLo, c, s);
REQUIRE_THAT(lHi, Catch::Matchers::WithinRel(5.0f, 1e-7f));
REQUIRE_THAT(lLo, Catch::Matchers::WithinRel(2.0f, 1e-7f));
REQUIRE_THAT(c, Catch::Matchers::WithinRel(1.0f, 1e-7f));
REQUIRE_THAT(s, Catch::Matchers::WithinAbs(0.0f, 1e-7f));
A = Matrix<2, 2>{2, 0, 0, 5};
QR::Solve2x2Eigen(A, 0, lHi, lLo, c, s);
REQUIRE_THAT(lHi, Catch::Matchers::WithinRel(5.0f, 1e-7f));
REQUIRE_THAT(lLo, Catch::Matchers::WithinRel(2.0f, 1e-7f));
REQUIRE_THAT(c, Catch::Matchers::WithinAbs(0.0f, 1e-7f));
REQUIRE_THAT(s, Catch::Matchers::WithinRel(1.0f, 1e-7f));
}
}
// ============================================================================
// TEST 6: Deflate
// ============================================================================
TEST_CASE("QR Building Block: Deflate", "[Matrix][QR]") {
// subdiag[0] = 1e-9 <= 1e-6 * (|2| + |3|) = 5e-6 -> deflated
// subdiag[1] = 0.5 > 1e-6 * (|3| + |4|) = 7e-6 -> kept
{
Matrix<3, 3> A{2, 1e-9f, 0, 1e-9f, 3, 0.5f, 0, 0.5f, 4};
QR::Deflate(A, 0, 2, 1e-6f);
REQUIRE(A.Get(1, 0) == 0.0f);
REQUIRE(A.Get(0, 1) == 0.0f);
REQUIRE_THAT(A.Get(2, 1), Catch::Matchers::WithinRel(0.5f, 1e-7f));
REQUIRE_THAT(A.Get(1, 2), Catch::Matchers::WithinRel(0.5f, 1e-7f));
// Diagonals untouched
REQUIRE_THAT(A.Get(0, 0), Catch::Matchers::WithinRel(2.0f, 1e-7f));
REQUIRE_THAT(A.Get(1, 1), Catch::Matchers::WithinRel(3.0f, 1e-7f));
REQUIRE_THAT(A.Get(2, 2), Catch::Matchers::WithinRel(4.0f, 1e-7f));
}
// Nothing deflated when all subdiagonals are well above tolerance
{
Matrix<3, 3> A{2, 0.1f, 0, 0.1f, 3, 0.2f, 0, 0.2f, 4};
QR::Deflate(A, 0, 2, 1e-6f);
REQUIRE_THAT(A.Get(1, 0), Catch::Matchers::WithinRel(0.1f, 1e-7f));
REQUIRE_THAT(A.Get(2, 1), Catch::Matchers::WithinRel(0.2f, 1e-7f));
}
}
// ============================================================================
// TEST 7: Tridiagonalize
// ============================================================================
TEST_CASE("QR Building Block: Tridiagonalize", "[Matrix][QR]") {
// 4x4 symmetric with a full (0,3) corner coupling
{
Matrix<4, 4> A{2, 1, 0, 1, 1, 3, 1, 0, 0, 1, 4, 1, 1, 0, 1, 5};
Matrix<4, 4> Aorig = A;
Matrix<4, 4> U{0};
QR::Tridiagonalize(A, U);
// Off-tridiagonal entries must be zero up to float32 roundoff (the
// Givens zeroing cancels only in exact arithmetic; residuals are
// ~1e-7 for O(1) entries).
REQUIRE_THAT(A.Get(0, 2), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(A.Get(2, 0), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(A.Get(0, 3), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(A.Get(3, 0), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(A.Get(1, 3), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(A.Get(3, 1), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
// Symmetry preserved exactly
for (uint8_t i = 0; i < 4; i++)
for (uint8_t j = 0; j < 4; j++)
REQUIRE(A.Get(i, j) == A.Get(j, i));
// U must be orthogonal
REQUIRE(isOrthogonal(U));
// Reconstruction: U * A_tri * U^T == Aorig (absolute check for
// originally-zero entries: WithinRel has no absolute fallback there)
Matrix<4, 4> UAt{};
U.Mult(A, UAt);
Matrix<4, 4> UAtU{};
UAt.Mult(U.Transpose(), UAtU);
for (uint8_t i = 0; i < 4; i++)
for (uint8_t j = 0; j < 4; j++) {
float actual = UAtU.Get(i, j);
float expected = Aorig.Get(i, j);
if (fabsf(expected) < 1e-3f)
REQUIRE_THAT(actual, Catch::Matchers::WithinAbs(0.0f, 1e-5f));
else
REQUIRE_THAT(actual,
Catch::Matchers::WithinRel(expected, 1e-5f));
}
// Spectrum invariants match the original
{
float tr0 = Aorig.Get(0, 0) + Aorig.Get(1, 1) + Aorig.Get(2, 2) +
Aorig.Get(3, 3);
float tr1 = A.Get(0, 0) + A.Get(1, 1) + A.Get(2, 2) + A.Get(3, 3);
REQUIRE_THAT(tr1, Catch::Matchers::WithinRel(tr0, 1e-6f));
REQUIRE_THAT(frob(A), Catch::Matchers::WithinRel(frob(Aorig), 1e-6f));
}
// Eigenvalues of the tridiagonal match the original (scipy reference):
// 6.0, 4.0, 3.0, 1.0
{
Matrix<4, 1> vals{};
Matrix<4, 4> vecs{};
QR::EigenQR(A, vecs, vals, 10000, 1e-6f);
REQUIRE_THAT(vals[0][0], Catch::Matchers::WithinRel(6.0f, 1e-4f));
REQUIRE_THAT(vals[1][0], Catch::Matchers::WithinRel(4.0f, 1e-4f));
REQUIRE_THAT(vals[2][0], Catch::Matchers::WithinRel(3.0f, 1e-4f));
REQUIRE_THAT(vals[3][0], Catch::Matchers::WithinRel(1.0f, 1e-4f));
}
}
// 5x5 symmetric
{
Matrix<5, 5> A{3, 1, 0, 0, 1, 1, 4, 1, 0, 0, 0, 1, 5, 1, 0, 0, 0, 1, 6, 1,
1, 0, 0, 1, 7};
Matrix<5, 5> Aorig = A;
Matrix<5, 5> U{0};
QR::Tridiagonalize(A, U);
// All |i - j| >= 2 entries zero up to float32 roundoff
for (uint8_t i = 0; i < 5; i++)
for (uint8_t j = 0; j < 5; j++)
if (i > j + 1 || j > i + 1)
REQUIRE_THAT(A.Get(i, j), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE(isOrthogonal(U));
Matrix<5, 5> UAt{};
U.Mult(A, UAt);
Matrix<5, 5> UAtU{};
UAt.Mult(U.Transpose(), UAtU);
for (uint8_t i = 0; i < 5; i++)
for (uint8_t j = 0; j < 5; j++) {
float actual = UAtU.Get(i, j);
float expected = Aorig.Get(i, j);
if (fabsf(expected) < 1e-3f)
REQUIRE_THAT(actual, Catch::Matchers::WithinAbs(0.0f, 1e-5f));
else
REQUIRE_THAT(actual,
Catch::Matchers::WithinRel(expected, 1e-5f));
}
}
// Already tridiagonal: U must come out as the identity
{
Matrix<3, 3> A{1, 2, 0, 2, 5, 2, 0, 2, 9};
Matrix<3, 3> U{0};
QR::Tridiagonalize(A, U);
for (uint8_t i = 0; i < 3; i++)
for (uint8_t j = 0; j < 3; j++) {
float expected = (i == j) ? 1.0f : 0.0f;
REQUIRE_THAT(U.Get(i, j), Catch::Matchers::WithinAbs(expected, 1e-7f));
}
}
}
// ============================================================================
// TEST 8: One full shifted QR step (integration of the blocks)
// ============================================================================
TEST_CASE("QR Building Block: Full Shifted QR Step", "[Matrix][QR]") {
// One Wilkinson-shifted QR step on the whole 3x3 block is a similarity
// transform, so all spectrum invariants (trace, sum of principal 2x2
// minors, determinant) must be preserved.
//
// A = [[1,2,3],[2,5,8],[3,8,9]]: tr = 15, e2 = -18, det = -4
{
Matrix<3, 3> A{1, 2, 3, 2, 5, 8, 3, 8, 9};
float tr0 = trace3(A); // 15
float e20 = e2_3x3(A); // -18
float det0 = det3(A); // -4
// mu from the trailing 2x2 [[5,8],[8,9]]: eigenvalues
// -1.246211251, 15.246211251; closest to d = 9 is 15.246211251 (Wilkinson)
float mu = QR::WilkinsonShift(A.Get(1, 1), A.Get(2, 1), A.Get(2, 2));
REQUIRE_THAT(mu, Catch::Matchers::WithinRel(15.246211251f, 1e-5f));
for (uint8_t i = 0; i < 3; i++)
A[i][i] -= mu;
// Bulge chase: rotations on (0,1) then (1,2)
float c = 0, s = 0;
QR::GivensRotation(A.Get(0, 0), A.Get(1, 0), c, s);
QR::ApplyRotationBothSides(A, 0, c, s);
QR::GivensRotation(A.Get(1, 1), A.Get(2, 1), c, s);
QR::ApplyRotationBothSides(A, 1, c, s);
for (uint8_t i = 0; i < 3; i++)
A[i][i] += mu;
// Symmetry preserved
for (uint8_t i = 0; i < 3; i++)
for (uint8_t j = 0; j < 3; j++)
REQUIRE(A.Get(i, j) == A.Get(j, i));
// Spectrum invariants preserved
REQUIRE_THAT(trace3(A), Catch::Matchers::WithinRel(tr0, 1e-5f));
REQUIRE_THAT(e2_3x3(A), Catch::Matchers::WithinRel(e20, 1e-5f));
REQUIRE_THAT(det3(A), Catch::Matchers::WithinRel(det0, 1e-5f));
}
// For TRIDIAGONAL input a single step keeps the tridiagonal structure
{
Matrix<3, 3> T{1, 2, 0, 2, 5, 2, 0, 2, 9};
float mu = QR::WilkinsonShift(T.Get(1, 1), T.Get(2, 1), T.Get(2, 2));
for (uint8_t i = 0; i < 3; i++)
T[i][i] -= mu;
float c = 0, s = 0;
QR::GivensRotation(T.Get(0, 0), T.Get(1, 0), c, s);
QR::ApplyRotationBothSides(T, 0, c, s);
QR::GivensRotation(T.Get(1, 1), T.Get(2, 1), c, s);
QR::ApplyRotationBothSides(T, 1, c, s);
for (uint8_t i = 0; i < 3; i++)
T[i][i] += mu;
// Corners must vanish up to float32 roundoff: tridiagonal form
// maintained. The cancellation is exact in exact arithmetic (the
// corner is s1*a - c1*b times a factor, and Givens gives s1*a = c1*b),
// so the residual is pure rounding, ~1e-6 for O(1) entries.
REQUIRE_THAT(T.Get(0, 2), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
REQUIRE_THAT(T.Get(2, 0), Catch::Matchers::WithinAbs(0.0f, 1e-5f));
}
}
+246
View File
@@ -0,0 +1,246 @@
#!/usr/bin/env python3
"""
Reference values for the QR eigen-decomposition building block tests
(unit-tests/qr-build-blocks-tests.cpp). Run this to verify/implement the
C++ implementation in src/QR.hpp / src/QR.cpp against numpy/scipy.
Conventions (match the C++ exactly):
* Givens zeroing rotation: G = [[c, s], [-s, c]], c = x/r, s = y/r,
r = hypot(x, y). G * (x, y)^T = (r, 0)^T.
* Similarity transform: A <- G A G^T (ApplyRotationBothSides).
* Eigenvector accumulation: V <- V G^T (ApplyRotationToVectors).
Vblock in the 2x2 closed form is [[c, -s], [s, c]] (same shape as G^T).
* Tridiagonalization: bottom-up Givens (i = N-2 down to k+1 per column k).
* Shifted QR loop: Wilkinson shift mu from the trailing 2x2, chase on the
trailing unreduced block [lo, hi], deflate by relative tolerance, peel
exact-zero subdiagonals, 2x2 closed-form termination.
* Pipeline: M0 = U * Mtri * U^T and Mtri = V * D * V^T =>
eigenvectors of M0 = U * V (columns), eigenvalues = diag(D).
Usage: python3 qr-reference-values.py
"""
import numpy as np
import scipy.linalg as sla
np.set_printoptions(precision=9, linewidth=120)
def givens(x, y):
"""c = x/r, s = y/r with r = hypot(x, y)."""
r = np.hypot(x, y)
if r == 0.0:
return 1.0, 0.0
return x / r, y / r
def rot(n, i, c, s):
"""G = I with [[c, s], [-s, c]] embedded at (i, i+1)."""
G = np.eye(n)
G[i:i + 2, i:i + 2] = np.array([[c, s], [-s, c]])
return G
def tridiagonalize(M0):
"""Bottom-up Givens tridiagonalization. Returns (Mtri, U) with
M0 = U Mtri U^T."""
n = len(M0)
M = M0.copy()
U = np.eye(n)
for k in range(n - 2):
for i in range(n - 2, k, -1):
c, s = givens(M[i, k], M[i + 1, k])
G = rot(n, i, c, s)
M = G @ M @ G.T
U = U @ G.T
return M, U
def wilkinson(a, b, d):
"""Eigenvalue of [[a, b], [b, d]] closest to d."""
delta = 0.5 * (a - d)
spread = np.sqrt(delta * delta + b * b)
return 0.5 * (a + d) - (spread if delta >= 0 else -spread)
def solve2x2(A, lo):
"""Closed form for the block at (lo, lo+1): (lHi, lLo, c, s) with
vHi = (c, s), vLo = (-s, c)."""
a = A[lo, lo]
b = A[lo, lo + 1]
e = A[lo + 1, lo]
d = A[lo + 1, lo + 1]
tr = a + d
det = a * d - b * e
disc = max(0.0, tr * tr - 4 * det)
lhi = 0.5 * (tr + np.sqrt(disc))
llo = 0.5 * (tr - np.sqrt(disc))
if b != 0.0:
v1 = lhi - a
nn = np.hypot(b, v1)
c, s = b / nn, v1 / nn
elif a >= d:
c, s = 1.0, 0.0
else:
c, s = 0.0, 1.0
return lhi, llo, c, s
def eigenqr(M0, tol=1e-12, max_iter=100000):
"""Full pipeline mirroring QR::EigenQR. Returns (eigs, W) where W has
the eigenvectors of M0 as columns."""
n = len(M0)
if n == 2:
l1, l2, c, s = solve2x2(M0, 0)
return np.array([l1, l2]), np.array([[c, -s], [s, c]])
M, U = tridiagonalize(M0)
V = np.eye(n)
hi = n - 1
for _ in range(max_iter):
# deflate: zero tiny subdiagonals (relative test)
for i in range(hi):
t = M[i + 1, i]
scale = abs(M[i, i]) + abs(M[i + 1, i + 1])
if abs(t) <= tol * scale:
M[i + 1, i] = M[i, i + 1] = 0.0
# peel exact-zero trailing subdiagonals
while hi > 0 and M[hi, hi - 1] == 0.0:
hi -= 1
if hi == 0:
break
# find start of trailing unreduced block
lo = hi
for i in range(hi - 1, -1, -1):
if M[i + 1, i] == 0.0:
break
lo = i
if lo + 1 == hi:
# closed-form 2x2 termination: set diagonal, fold Vblock in
l1, l2, c, s = solve2x2(M, lo)
Vb = np.eye(n)
Vb[lo:lo + 2, lo:lo + 2] = np.array([[c, -s], [s, c]])
V = V @ Vb
M[lo, lo] = l1
M[lo + 1, lo + 1] = l2
M[lo + 1, lo] = M[lo, lo + 1] = 0.0
if lo == 0:
break
hi = lo - 1
continue
# full shifted step on [lo, hi] (shift applies to the active block)
mu = wilkinson(M[hi - 1, hi - 1], M[hi, hi - 1], M[hi, hi])
diag = M.diagonal().copy()
diag[lo:hi + 1] -= mu
np.fill_diagonal(M, diag)
c, s = givens(M[lo, lo], M[lo + 1, lo])
G = rot(n, lo, c, s)
M = G @ M @ G.T
V = V @ G.T
for i in range(lo + 1, hi):
c, s = givens(M[i, i], M[i + 1, i])
G = rot(n, i, c, s)
M = G @ M @ G.T
V = V @ G.T
diag = M.diagonal().copy()
diag[lo:hi + 1] += mu
np.fill_diagonal(M, diag)
eigs = np.diag(M).astype(float)
order = np.argsort(eigs)[::-1] # descending, like the C++ test harness
eigs = eigs[order]
W = U @ V
W = W[:, order]
return eigs, W
def report(name, val, ref=None, tol=1e-6):
ok = "OK " if ref is None or np.allclose(val, ref, rtol=tol, atol=tol) else "FAIL"
print(f"[{ok}] {name} = {val}")
if ref is not None:
print(f" scipy/numpy ref = {ref}")
def main():
print("=== TEST 1: GivensRotation ===")
c, s = givens(2.0, 1.0)
print(f" c = {c} s = {s}")
# G * (x, y)^T = (r, 0)^T: G = [[c, s], [-s, c]]
assert abs(c * 2 + s * 1 - np.sqrt(5)) < 1e-15
assert abs(-s * 2 + c * 1) < 1e-15
print("\n=== TEST 2: ApplyRotationBothSides A <- G A G^T ===")
A = np.array([[3.0, 4.0, 5.0], [6.0, 7.0, 8.0], [9.0, 10.0, 11.0]])
G = rot(3, 0, 0.6, 0.8)
B = G @ A @ G.T
print(B)
A = np.array([[5.0, 0.0, 1.0], [0.0, 6.0, 2.0], [1.0, 2.0, 7.0]])
c, s = givens(6.0, 2.0)
G = rot(3, 1, c, s)
B = G @ A @ G.T
print(B)
print("\n=== TEST 3: V accumulation V <- V G^T ===")
V = np.eye(3)
G = rot(3, 0, 0.894427191, 0.447213595)
V = V @ G.T
print(V)
V2 = V @ rot(3, 1, 0.848874681, 0.528748047).T
print(V2)
print("\n=== TEST 4: Solve2x2Eigen ===")
for A in (np.array([[5.0, 8.0], [8.0, 9.0]]), np.array([[1.0, 2.0], [3.0, 4.0]])):
l1, l2, c, s = solve2x2(A, 0)
ref = np.linalg.eigvalsh(A) if np.allclose(A, A.T) else np.linalg.eigvals(A)
print(f" A={A.ravel()} lHi={l1} lLo={l2} c={c} s={s} ref={np.sort(ref)[::-1]}")
print("\n=== TEST 8: WilkinsonShift ===")
print(f" W(5, 8, 9) = {wilkinson(5, 8, 9)}")
print(f" W(4, 2, 7) = {wilkinson(4, 2, 7)}")
print(f" W(9, 2, 5) = {wilkinson(9, 2, 5)}")
print("\n=== TEST 8b: one full shifted chase step on tridiagonal 3x3 ===")
T = np.array([[1.0, 2.0, 0.0], [2.0, 5.0, 2.0], [0.0, 2.0, 9.0]])
mu = wilkinson(5, 2, 9)
M = T - mu * np.eye(3)
c, s = givens(M[0, 0], M[1, 0])
M = rot(3, 0, c, s) @ M @ rot(3, 0, c, s).T
c, s = givens(M[1, 1], M[2, 1])
M = rot(3, 1, c, s) @ M @ rot(3, 1, c, s).T
M = M + mu * np.eye(3)
print(f" mu = {mu}")
print(M)
print(f" corners: {M[0, 2]}, {M[2, 0]} (exact-arithmetic zeros)")
print(f" trace {M.trace():.15f} (was {T.trace()})")
print("\n=== TEST 7: Tridiagonalize ===")
M4 = np.array([[2.0, 1, 0, 1], [1, 3, 1, 0], [0, 1, 4, 1], [1, 0, 1, 5]])
M, U = tridiagonalize(M4)
print(" M4 tridiagonalized:\n", M)
print(f" reconstruction U M U^T == M4: {np.allclose(U @ M @ U.T, M4, atol=1e-9)}")
M5 = np.array([[3.0, 1, 0, 0, 1], [1, 4, 1, 0, 0], [0, 1, 5, 1, 0],
[0, 0, 1, 6, 1], [1, 0, 0, 1, 7]])
M, U = tridiagonalize(M5)
print(" M5 tridiagonalized:\n", M)
print(f" reconstruction: {np.allclose(U @ M @ U.T, M5, atol=1e-9)}")
print("\n=== End-to-end: random symmetric vs scipy.linalg.eigh ===")
rng = np.random.default_rng(12345)
worst = 0.0
for n in range(3, 9):
M0 = rng.normal(size=(n, n))
M0 = (M0 + M0.T) / 2
eigs, W = eigenqr(M0.astype(float))
ref = sla.eigh(M0)
e_err = np.max(np.abs(np.sort(eigs) - ref[0]))
resid = np.linalg.norm(W @ np.diag(eigs) @ W.T - M0)
ortho = np.linalg.norm(W.T @ W - np.eye(n))
print(f" n={n}: eigs_err={e_err:.2e} resid={resid:.2e} ortho={ortho:.2e}")
worst = max(worst, e_err, resid, ortho)
print(f"\nworst over all n: {worst:.2e}")
assert worst < 1e-10, "end-to-end reference FAILED"
print("ALL REFERENCES OK")
if __name__ == "__main__":
main()